Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs76814181 chr14:105064501 G/A 0 168 22.57 22.78 1.67 KM Plot
UCEC rs76831978 chr3:47977014 T/C 6.92E-7 172 22.63 22.25 11.53 KM Plot
UCEC rs76859629 chr7:20671782 T/G 1.29E-11 172 22.63 20.13 4.33 KM Plot
UCEC rs7692385 chr4:57214407 C/T 1.5E-5 174 33.28 21.55 18.88 KM Plot
UCEC rs7693683 chr4:57239180 C/T 1.5E-5 174 33.28 21.55 18.88 KM Plot
UCEC rs7695701 chr4:57190356 A/G 4.55E-5 174 20.33 19.53 22.97 KM Plot
UCEC rs76997746 chr14:73502400 C/T 4.61E-7 174 22.57 27.05 10.33 KM Plot
UCEC rs7701154 chr5:77716621 G/A 2.78E-5 173 18.37 26.07 21.3 KM Plot
UCEC rs7702341 chr5:42261601 C/G 1.32E-5 174 22.38 28.53 16.45 KM Plot
UCEC rs77072593 chr7:20680130 G/A 9.52E-12 174 22.67 19.17 4.33 KM Plot
UCEC rs7716529 chr5:77738637 A/T 9.79E-5 172 18.37 26.07 21.6 KM Plot
UCEC rs77221555 chr14:73353331 G/A 6.53E-7 169 22.85 21.27 10.33 KM Plot
UCEC rs77245016 chr7:20676909 A/T 1.12E-11 173 22.63 19.17 4.33 KM Plot
UCEC rs7732181 chr5:143585501 G/T 5.92E-9 170 22.57 29.03 2.45 KM Plot
UCEC rs77355633 chr14:105077910 C/T 0 168 22.57 22.78 1.67 KM Plot